Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954358.1_cds_XP_016493253.1_83384
CDS Infomation

[gene=LOC107812624] [db_xref=GeneID:107812624] [protein=exocyst complex component SEC10-like isoform X1] [protein_id=XP_016493253.1] [location=join(5081..5176,5276..5527,5613..5687,6137..6238,6530..6580,6727..6832,8025..8144,9760..9851,10131..10296,10382..10458,10811..10909,10997..11087,11508..11593,12106..12279,13672..13772,14378..14435)] [gbkey=CDS]
Sequence

ATGAAAGAGATTAGAGATGGATCGCAGGCTAATCGTATGTCAAAATCTGCATCTTCTGAC
TCTAATCCACTAGTTCTTGATGTAGATGATTTCAAGGGAAACTATTCATTTGATGATTTG
TTTGGTAACTTGGTGACTGAGCTATTGCCTTCTTATCTGGAAAAAGAAGCAGACTCATCA
GAAAGTCACGGGAACATCGTTGGAATTGATGCACTATCAAATGGGAATTTGCGGTCAAAT
GCAGGAAAATCAGCTCAAGGACTATCAAGCCCATTGTTCCCTGAAGTTGATGCTTTATTA
TCTTTATTTAAGAATTCAAGCACCCAATTGGTTGATCTCAAAAGGCAGGTTGATGGTAAA
CTAAACAATCTCAAAAAAGAAGTTGCTGTCCAAGACTTGAAGCACCGTAAGACACTTGCT
GAGCTGGAAAAAGGTGTAGATGGATTGTTTGGTAGCTTTGCACGTCTAGATTCACGTATA
TCCAGTGTGGGTCATACTGCAGCCAAAATAGGAGATCACTTGCAGAGTGCAGATACGCAG
AGAGAATCTGCCAGTCAGACGATAGAGCTCATAAAGTACTTGATGGAGTTCAATAGAAGT
CCAGGAGACCTGACAGCACTTTCTCCTTTATTTACTGATGATAACCGCGTTGCTGAAGCT
GCTTCAATTGCACAGAAATTAAGATCATTTGCTGATGAAGATGTTGGAAGACAAAAAACA
ACTGTCTCCTCTGCTGTTGGCAATGCAACTTCAAGTAAAGGATTGGAAGTTGCTATCTCA
AACCTTCAAGAGTACTGCAATGAGTTGGAAAACAGATTATTAGCTCGATTTGATGCGGCT
ACACAGAAGCGCGATTTGACTAGGATGGGTGAATATGCTAAAATTTTGTCACAGTTTAAC
AGGGGTACCAGTGCCATGCAACACTACGTAGGATTACGTCCAATGTTTGATATTGAGGTG
ATGAATGCGGATGCCAAATTGGTTCTTGGTGATGAGGGTGCCCAACCCAGCCCTAGCAAT
GTTGCTAAGGGACTTTCTTCAATGTTTAAAGAGATTACAGACACGGTGCGAAAAGAAGCA
ACCACCATAGCAGCAGTTTTCCCTTCCCCTAAGGATGTAATGTCGATATTAGTTCAGCGT
GTCTTGGAGGATCGTGTTCCAAAACTTCTAGAGAAGCTCTTACAGAAACCATCTCTTGTT
AACCCACCTTCCATGGAAGAAGGTGGACTTGTATTATATCTCAGATTGCTGGCCGTTGCA
TATGAGAAGACACAAGAGTTTTCTAAGGACTTACGAAGTGTAGGATGTGGTGACTTGGAT
GTTGAAGGTTTGACTGAGTCTTTGTTTCTACCACACAAAGACATATACGTGGAGTGCGAG
CAAGCCTCTCTTAAGCAACTTTACAAAGCTAAGATGGACGAACTACGTAGTGAAAGCCAG
CTGTCCTCAGAGTCGTCTGGGACAATTGGACGCTCAAAAGGTGCTTCAATGGCACTTTCT
AACCCGGAAATTTCTGTAGCTGTGGTGACAGAGTTTGTTCGCTGGAACGAAGAAGCAACA
TCCAGATGCAGTTTGTTTTCATTACAGCAAAATACACTTTGGATAATCGTATCACATGTG
CTAGTATGTGCATCTCAGCTGGACACTGGATACCAAAAAACAGAAGTGTCGGATGTTGTT
TCCTATATCCTGCTACACTTGCTGCTAGTGTTAAAGTTGTTTTCACATGCCTTTTGGACC
AGGTAA

Peptide Sequence

PEP ID

XP_016493253.1
PEP Infomation

PREDICTED: exocyst complex component SEC10-like isoform X1 [Nicotiana tabacum]
Sequence

MKEIRDGSQANRMSKSASSDSNPLVLDVDDFKGNYSFDDLFGNLVTELLPSYLEKEADSS
ESHGNIVGIDALSNGNLRSNAGKSAQGLSSPLFPEVDALLSLFKNSSTQLVDLKRQVDGK
LNNLKKEVAVQDLKHRKTLAELEKGVDGLFGSFARLDSRISSVGHTAAKIGDHLQSADTQ
RESASQTIELIKYLMEFNRSPGDLTALSPLFTDDNRVAEAASIAQKLRSFADEDVGRQKT
TVSSAVGNATSSKGLEVAISNLQEYCNELENRLLARFDAATQKRDLTRMGEYAKILSQFN
RGTSAMQHYVGLRPMFDIEVMNADAKLVLGDEGAQPSPSNVAKGLSSMFKEITDTVRKEA
TTIAAVFPSPKDVMSILVQRVLEDRVPKLLEKLLQKPSLVNPPSMEEGGLVLYLRLLAVA
YEKTQEFSKDLRSVGCGDLDVEGLTESLFLPHKDIYVECEQASLKQLYKAKMDELRSESQ
LSSESSGTIGRSKGASMALSNPEISVAVVTEFVRWNEEATSRCSLFSLQQNTLWIIVSHV
LVCASQLDTGYQKTEVSDVVSYILLHLLLVLKLFSHAFWTR

Transcript Sequence

Gene sequence data has not been registered.